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Virologica Sinica, 21 (5) : 468-471, 2006
Research Article
Cloning and Sequence Analysis of the Nucleocapsid Gene of a Variant Strain (793/B) of Avian Infectious Bronchitis Virus
College of Animal Science and Technology, Shandong Agricultural University, Tai,an 271018 China
 Correspondence:
(295.73KB)  
Abstract
A pair of primers were designed and synthesized based onthe genomic sequences of the Nucleocapsid gene of IBV in Genbank. The gene encoding the nucleocapsid protein (N) was amplified by RT-PCR. Sequencing data showed that the complete gene encoding the nucleocapsid of IBV isolate (793/B) consisted of 1229 nucleotides. Sequence analysis showed that 88 point mutations were found in the N gene, and one nucleotide was deleted inform position 991. By comparison with 11 strains in GenBank, the sequence identity was 86.9%~91.4%, and the identity of the deduced amino acids was 75.8%~77.5%. The results showed that there were major variatons in the N gene of 793/B.
  Published online: 20 Sep 2006
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