TANG Shao, TANG Li, WANG Bin, Nobumichi Kobayashi and YANG Ji. Structural Protein rp 7 Gene Sequence Analysis of Human Group B Rotavirus Strain W H-2[J]. Virologica Sinica, 2003, 18(5): 432-436.
Citation: TANG Shao, TANG Li, WANG Bin, Nobumichi Kobayashi, YANG Ji. Structural Protein rp 7 Gene Sequence Analysis of Human Group B Rotavirus Strain W H-2 .VIROLOGICA SINICA, 2003, 18(5) : 432-436.

人B组轮状病毒vp7基因的克隆和序列分析

  • 摘要:利用逆转录一聚合酶链反应(RT-PCR)技术,扩增了人B组轮状病毒WH.2vp7基因,连接到克隆载体pUCm—T, 并对其基因序列进行了分析。WH一2与ADRV的同源性达98%,与印度加尔各达分离株CAL.1达92%,而与动 物B组轮状病毒同源性差别较大,如与IDIR(鼠)同源性仅为58%,与WD653(牛)B组轮状病毒同源性为63%。 与ATI(牛)同源性为61%。对vp7基因的一-~级结构分析发现其mRNA折叠形成多达18个发卡环状结构。vP7 蛋白是249个氨基酸组成,分子量为28.4kDa,含有3个潜在的N连接的糖基化位点和多个磷酰化位点,从氨基 酸序列的同源性来看,WH一2与ADRV的同源性达99%,与CAL一1达95%,而ID 仅为51%,说明了WH.2和 ADRV的起源相同。此研究对了解B组轮状病毒基因的进化和变异规律具有重要意义,也将为B组轮状病毒预防 性疫苗的研制提供科学的依据。

Structural Protein rp 7 Gene Sequence Analysis of Human Group B Rotavirus Strain W H-2

  • Abstract:The VP7 gene(vp7)ofHuman group B rotavirus(GBRV)strain WH一2 was amplified and cloned into the plasmid pUCm—T by reverse transcription polymerase chain reaction(RT-PCR).Positive vp7 gene cloned plasmid pT_VP7 was sequenced and analyzed by software GeneBee,the nucleotide sequence of WH一2 vp7 gene showed high identities(more than 9O%)to that of other human GBRV,with low identities(1ess than 65%)to that of animal GBRV.The secondary structure of WH-2 vp7 mRNA was constructed by software RNAstructure 3.7 an d RnaViz 2.0,18 stem—loop structures were found on it. Th e polypeptide encoded by W H一2 vp7 gene contains 249 amino acids with a calculated molecular weight of 28.4 kDa.The protein contains three potential N—linked glycosylation sites an d a hydrophobic signal—liked sequence at its amino termina1.Comparied with other GBRV,WH一2 vp7 demonstrated 99% an d 95% of am ino acids similarity with ADRV and CAL.1 respectively,only 5 1% witIl IDⅡ .Th ese findings suggested that W H一2 and ADRV might originate from a common an cestral virus,district from an imal W H一2 vp7 reported SO far.

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    Structural Protein rp 7 Gene Sequence Analysis of Human Group B Rotavirus Strain W H-2

    • 1. 1.Wuhan Centers for diseases Prevention and Control,Wuhan 430022,China

    Abstract: Abstract:The VP7 gene(vp7)ofHuman group B rotavirus(GBRV)strain WH一2 was amplified and cloned into the plasmid pUCm—T by reverse transcription polymerase chain reaction(RT-PCR).Positive vp7 gene cloned plasmid pT_VP7 was sequenced and analyzed by software GeneBee,the nucleotide sequence of WH一2 vp7 gene showed high identities(more than 9O%)to that of other human GBRV,with low identities(1ess than 65%)to that of animal GBRV.The secondary structure of WH-2 vp7 mRNA was constructed by software RNAstructure 3.7 an d RnaViz 2.0,18 stem—loop structures were found on it. Th e polypeptide encoded by W H一2 vp7 gene contains 249 amino acids with a calculated molecular weight of 28.4 kDa.The protein contains three potential N—linked glycosylation sites an d a hydrophobic signal—liked sequence at its amino termina1.Comparied with other GBRV,WH一2 vp7 demonstrated 99% an d 95% of am ino acids similarity with ADRV and CAL.1 respectively,only 5 1% witIl IDⅡ .Th ese findings suggested that W H一2 and ADRV might originate from a common an cestral virus,district from an imal W H一2 vp7 reported SO far.

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