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ORF Position Length a Predicted protein Related phage(s) or microbes E valueb 1 419-685 88 2 774-1334 186 3 1331-1567 78 4 1545-1748 67 5 1949-3202 417 6 3292-3837 181 7 3956-4624 222 8 4624-5133 169 9 5078-5371 97 10 5377-6636 419 11 6641-8815 724 DNA primase/helicase Pf-WMP3, P60, Syn5, P-SSP7, K1F, Pseudomonas phage phi15, vibriophage VP4, phiYeO3-12, T3, T7 0.0 12 8876-9076 66 13 9089-9295 68 14 9299-11167 622 DNA polymerase Pf-WMP3, Pf-WMP4, Marinithermus hydrothermalis DSM 14884 0.0 15 11149-11304 51 16 11497-11742 81 17 11826-12788 320 18 13017-13193 58 19 13272-13514 80 20 13522-14025 167 ERF family protein(phage-associatedrecombination protein) Nostoc flagelliforme str. Sunitezuoqi 1e-26 21 14038-14247 69 22 14210-14548 112 23 14627-15487 286 gp17(exchanged genefrom other phages) Roseobacter phage SIO1 2e-18 24 16753-15551 400 Tail fiber Pf-WMP3, Enterobacter cloacae subsp. Cloacae ATCC 13047, P2 0.0 25 20201-16740 1153 Tail fiber Pf-WMP3 0.0 26 25437-20299 1712 Tail protein Pf-WMP3, Pf-WMP4 0.0 27 28469-25485 994 Endopeptidase(M23/M37) Pf-WMP3, Pf-WMP4, Cyanothece sp. PCC 7424, Lyngbya majuscula 3L 0.0 28 29661-28471 396 Internal protein Pf-WMP3 0.0 29 32748-29665 1027 Tail tube B Pf-WMP3 0.0 30 33103-32738 121 Recombinationendonuclease Ⅶ Streptomyces sp. e14, vibriophage ICP2_2006_A, vibriophage VP4, vibrio phage phiYeO3-12, S-PM2, Mycobacterium phage L5 5e-15 31 33773-33108 221 Tail tube A Pf-WMP3 5e-164 32 34166-34050 38 33 35361-34216 381 Capsid Pf-WMP3, Pf-WMP4, Deep-sea thermophilic phage D6E, uncultured phage MedDCM-OCT-S04-C24, Cyanophage NATL2A-133, NATL1A-7, P-SSP7 0.0 34 36067-35384 227 Scaffolding Pf-WMP3 6e-165 35 38027-36072 651 Portal Pf-WMP3, Pf-WMP4, Roseobacter phage SIO1, T3, T7 0.0 36 38467-38042 141 DNA endonuclease Methanopyrus kandleri AV19 0.22 37 40201-38504 565 Terminase Pf-WMP3, Pf-WMP4, Synechococcus phage S-CBS2, Cyanophage 9515-10a, NATL1A-7, Vibrio phage VP93, T7 0.0 38 40807-40307 166 39 41298-40813 161 40 41594-41319 91 41 41850-41599 83 a Amino acid. b Each putative ORF was used to search for homologs by BLASTp against the non-redundant database and Swiss-Prot protein database in the NCBI. The phage or microbe with the most closely related sequence is listed first and that. value is reported. Table 1. ORFs of PP genome and their presumed functions
Figure 5 个
Table 1 个
