Figure 3个  Table 2个
    • Virus Primer Sequence (5′–3′)a Region Amplicon size (bp) Reference
      Mammarenavirus Arena-F1 AYNGGNACNCCRTTNGC L gene First round: 938 Li et al., 2015
      Arena-R1 TCHTAYAARGARCARGTDGGDGG
      Arena-F2 GGNACYTCHTCHCCCCANAC Second round: 611
      Arena-R2 AGYAARTGGGGNCCNAYKATG
      Hantavirus HAN-L-F1 ATGTAYGTBAGTGCWGATGC L gene First round: 453 Klempa et al., 2006
      HAN-L-R1 AACCADTCWGTYCCRTCATC
      HAN-L-F2 TGCWGATGCHACIAARTGGTC Second round: 385
      HAN-L-R2 GCRTCRTCWGARTGRTGDGCAA
      HEV DE-F4228 ACYTTYTGTGCYYTITTTGGTCCITGGTT RdRp gene First round: 371 Drexler et al., 2012
      DE-R4598 CCGGGTTCRCCIGAGTGTTTCTTCCA
      DE-R4565 GCCATGTTCCAGAYGGTGTTCCA Second round: 338
      Note: aR: G/A; Y: C/T; S: G/C; W: A/T; M: A/C; K: G/T; H: A/C/T; N: A/T/C/G; I: inosine.

      Table 1.  Sequences of primers used for RT-PCR and sequencing

    • Virus Species Total
      R. norvegicus R. flavipectus S. murinus
      Mammarenavius a14/209 (6.70) 0/16 (0.00) 1/196 (0.51) 15/421 (3.56)
      Hantavirus 28/209 (13.40) 0/16 (0.00) 1/196 (0.51) 29/421 (6.89)
      HEV 6/209 (2.87) 0/16 (0.00) 1/196 (0.51) 7/421 (1.66)
      Note: apositive samples/tested samples (%)

      Table 2.  Detection rates of mammarenavius, hantavirus and HEV by RT-PCR in small mammals derived from Shenzhen city, China