Pitfalls of restriction enzyme analysis in identifying, characterizing, typing, and naming viral pathogens in the era of whole genomedata, as illustrated by HAdV type 55

Figure 2个 Table 1个

	HAdV-B55 SGN1222	HAdV-B11p	HAdV-B14p	HAdV-B14p1
HAdV-B55 QS-DLL	99.8	97.6	98.8	98.8
HAdV-B55 SGN1222		97.6	98.9	98.9
HAdV-B11p			97.2	97.2
HAdV-B14p				99.7
Note: Several subspecies B2 human adenoviruses are nearly identical to each other with regards to their genome sequences, as noted by genome percent identities. Small recombinant regions do not affect the overall percent identity to a significant degree. This presents difficulties in discriminating each individual virus. These values were calculated using the software EMBOSS Stretcher (http://www.ebi.ac.uk/Tools/psa/emboss_stretcher/nucleotide.html).

Table 1. Genome percent identities