-
-
-
-
-
-
-
Sample types No. of test samples/no. of positive samples (% positive) Lymph 180/93 (51.7) Oral swab 59/6 (10.2) Rectal swab 56/9 (16.1) Total 295/108 (36.6) Table 1. Prevalence of PAdVB-HNU1 in porcine samples collected in China.
-
Gene product Location(s) (nt)a Size (aa) Amino acid identity (%) with: GC content (%) PAdVNADC1 C.sea lion AdV1 PAdVA PAdVC E1 ORF 1 Termini 485–1039 186 94 29 22 23 55 E1B 19 kDa 1762–2220 152 NI 26 14 NI 54 E1B 55 K 2127–3368 413 95 38 24 28 64 IX 3466–3801 111 100 29 24 26 56 184R 3981–4280 99 NA NI 50 NI 48 ORF6 26, 760–27, 041 93 96 NI NI NI 46 ORF7 26, 242–26, 760 172 97 NI NI NI 56 ORF4 27, 022–27, 561 119 99 NI NI NI 49 U exon 27, 560–27393c 55 100 53 38 NI 48 Fiber 27, 575–29, 764 729 94 28 14 14 55 E434kDa 30, 753–30004c 249 NA 36 28 26 51 dUTPase 31, 592–31164c 145 NA 50 NI 40 62 E415kDa 31, 151–30750c 133 NA 30 NI NI 53 IVa2 Center 3891–5218, 5298–5310c 373 NA 69 58 65 50 pol 4982–8410, 12, 937–12966c 1037 NA 69 65 55 55 11.5 kDa 6087–6407 106 NA NI NI NI 54 p52k 10, 128–11, 339 403 NA 61 47 48 56 Penton base 13, 035–14, 483 482 NA 76 60 63 53 pV 15, 234–16, 175 313 NA 28 14 23 61 pX 16, 197–16, 391 64 NA 70 48 59 57 pVI 16, 428–17, 159 244 NA 48 34 44 61 pTP 8263–10, 095, 13, 097–13162c 595 NA 72 55 58 59 pⅢa 11, 266–12, 927 554 NA 62 43 48 58 p33K 24, 249–24, 423, 24, 690–25, 000 161 NA 52 29 NI 64 p22K 24, 625–24, 912 95 NA 48 29 NI 55 pVⅡ 14, 486–15, 178 230 NA 48 27 24 65 Hexon 17, 201–20, 161 986 NA 77 63 66 57 protease 20, 165–20, 791 208 NA 64 63 57 54 DBP 22, 379–20853c 508 NA 55 41 39 65 p100K 22, 394–24, 403 669 NA 64 50 54 58 pVⅢ 25, 031–25, 696 221 94 57 50 52 62 NA not applicable due to the lack of detectable similarity, NI homologous gene not identified.
aThe letter "c" in this column indicates that those genes are encoded by the complementary strand.Table 2. Putative proteins encoded by PAdV-B-HNU1.
Figure 6 个
Table 2 个