-
-
-
-
-
-
-
Pool name Number of ticks Host Area Location Tick01 93 Domestic dogs Shanghai A Tick02 94 Domestic dogs Hebei B Tick03 95 Domestic sheep Hebei B Tick04 96 Domestic sheep Henan C Tick05 97 Domestic cattle Hubei D Tick06 98 Domestic dogs Henan C Table 1. Sampling information of ticks.
-
Classification Rhipicephalus Haemaphysalis Locations (Host) R. sanguineus
Location A (Dog)R. turanicus
Location B (Dog)R. turanicus
Location B (Sheep)R. microplus
Location D (Cattle)H. longicornis
C (Sheep)H. flava
Location C (Dog)NSRV1 Chuviridae 91.4 73.66 87.26 1.98 0.64 0 NSRV2 Phenuiviridae 1.55 13.88 4.33 0 0 0.35 All viruses 92.95 87.54 91.59 0 0 0 The percentage of total reads were shown.
NSRV negative-sense RNA virus.Table 2. Presence and abundance of newly discovered RNA viruses in different tick species from domestic animals.
-
Family Classification Reads numbers for different viral families Location A (Dog) Location B (Dog) Location B (Sheep) Location C (Sheep) Location D (Dog) Location D (Cattle) None DNA virus 0 0 2 3 0 6 RNA virus 1531 6590 2721 1 2 76 Unclassified virus 13 89 42 4 3 14 Phenuiviridae ssRNA virusa 50 1783 202 2 1 1 Rhabdoviridae ssRNA virus 7 67 20 0 1 16 Retroviridae ssRNA virus 4 13 2 42 22 16 Picornaviridae ssRNA virus 0 0 0 11 10 6 Flaviviridae ssRNA virus 0 0 0 0 0 4 Paramyxoviridae ssRNA virus 0 0 0 1 0 0 Poxviridae dsDNA virus 0 1 0 9 6 30 Iridoviridae dsDNA virus 5 1 0 13 10 8 Phycodnaviridae dsDNA virus 0 1 0 4 6 23 Caulimoviridae dsDNA virus 1 1 1 15 8 4 Siphoviridae dsDNA virus 0 0 0 1 0 26 Myoviridae dsDNA virus 0 0 0 0 0 26 Papillomaviridae dsDNA virus 0 5 7 13 0 0 Polydnaviridae dsDNA virus 0 0 0 0 7 5 Alloherpesviridae dsDNA virus 0 0 0 3 4 2 Herpesviridae dsDNA virus 0 0 0 3 4 1 Microviridae ssDNA virus 2 0 1 1 0 1 Parvoviridae ssDNA virus 2 0 1 0 0 0 All viruses 1615 8551 2999 126 84 263 DNA deoxyribonucleic acid, dsDNA double-stranded deoxyribonucleic acid, ssRNA single-stranded ribonucleic acid. Table 3. Presence and abundances of viral families from different locations.
Figure 6 个
Table 3 个