-
Amonsin A, Payungporn S, Theamboonlers A. Genetic characterization of H5N1 influenza A viruses isolated from zoo tigers in Thailand[J]. Virology, 2006, 344(): 480-491. doi: 10.1016/j.virol.2005.08.032
-
Bush R M, Fitch W M, Bender C A. Positive selection on the H3 hemagglutinin gene of human influenza virus A[J]. Mol Biol Evol, 1999, 16(): 1457-1465. doi: 10.1093/oxfordjournals.molbev.a026057
-
Campitelli L, Ciccozzi M, Salemi M. H5N1 influenza virus evolution: a comparison of different epidemics in birds and humans (1997-2004)[J]. J Gen Virol, 2006, 87(): 955-960. doi: 10.1099/vir.0.81397-0
-
Choi Y K, Ozaki H, Webby R J. Continuing Evolution of H9N2 Influenza Viruses in Southern China[J]. J Virol, 2004, 78(): 8609-8614. doi: 10.1128/JVI.78.16.8609-8614.2004
-
Fitch W M, Leiter J M E, Li X. Positive Darwinian evolution in human influenza A viruses[J]. Proc Natl Acad Sci USA, 1991, 88(): 4270-4274. doi: 10.1073/pnas.88.10.4270
-
Gambaryan A, Yamnikova S, Lvov D. Receptor specificity of influenza viruses from birds and mammals: new data on involvement of the inner fragments of the carbohydrate chain[J]. Virology, 2005, 334(): 276-283. doi: 10.1016/j.virol.2005.02.003
-
Guan Y, Shortridge K F, Krauss S. Molecular characterization of H9N2 influenza viruses: Were they the donors of the "internal" genes of H5N1 viruses in Hong Kong[J]. Proc Natl Acad Sci USA, 2000, 96(): 9363-9367.
-
Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood[J]. Syst Biol, 2003, 52(): 696-704. doi: 10.1080/10635150390235520
-
Ilyushina N A, Rudneva I A, Gambaryan A S. Receptor specificity of H5 influenza virus esca-pemutants[J]. Virus Res, 2004, 100(): 237-241. doi: 10.1016/j.virusres.2003.12.032
-
Ina Y, Gojobori T. Statistical analysis of nucleotide sequences of the hemagglutinin gene of human influenza A viruses[J]. Proc Natl Acad Sci USA, 1994, 91(): 8388-8392. doi: 10.1073/pnas.91.18.8388
-
Keawcharoen J, Oraveerakul K, Kuiken T. Avian Influenza H5N1 in Tigers and Leopards[J]. Emerg Infect Dis, 2004, 10(): 2189-2191. doi: 10.3201/eid1012.040759
-
Kosakovsky Pond S L, Frost S D W. Not So Different After All: A Comparison of Methods for Detecting Amino Acid Sites Under Selection[J]. Mol Biol Evol, 2005, 22(): 1208-1222. doi: 10.1093/molbev/msi105
-
Kosakovsky Pond S L, Frost S D W, Grossman Z. Adaptation to different human populations by HIV-1 revealed by codon-based analyses[J]. PLoS Comp Biol, 2006, 2(): e62-. doi: 10.1371/journal.pcbi.0020062
-
Kosakovsky Pond S L, Frost S D W, Muse S V. 2005. HyPhy: hypothesis testing using phylogenies Bioin-formatics, 21: 676-679.
-
Matrosovich M N, Krauss S, Webster R G. H9N2 influenza A viruses from poultry in Asia have human virus-like receptor specificity[J]. Virology, 2001, 281(): 156-162. doi: 10.1006/viro.2000.0799
-
Perez D R, Lim W, Seiler J P. Role of Quail in the interspecies trans-mission of H9 influenza A viruses: molecular changes on HA that correspond to adaptation from ducks to chickens[J]. J Virol, 2003, 77(): 3148-3156. doi: 10.1128/JVI.77.5.3148-3156.2003
-
Scholtissek C, Burger H, Kistner O. The nucleoprotein as a possible major factor in determining host specificity of influenza H3N2 viruses[J]. Virology, 1985, 147(): 287-294. doi: 10.1016/0042-6822(85)90131-X
-
Shi W F, Gibbs M J, Zhang Y Z. Genetic Analysis of Four Porcine Avian Influenza Viruses Isolated from Shandong, China[J]. Arch Virol, 2008, 153(): 211-217. doi: 10.1007/s00705-007-1083-1
-
Webster R G, Bean W J, Gorman O T. Evolution and ecology of influenza A viruses[J]. Microbiol Rev, 1992, 1992(56): 152-179.
-
Yang Z H, Nielsen R, Goldman N. Codon-Substitution Models for Heterogeneous Selection Pressure at Amino Acid Sites[J]. Genetics, 2000, 155(): 431-449.