-
-
-
-
-
-
Gene Virus Primer name Sequence (5'-3') TM1/TM2 (℃) References g20 Cyanomyovirus CPS1.1 F
CPS8.8 RGTAGWATWTTYTAYATTGAYGTWGG
ARTAYTTDCCDAYRWAWGGWTC35/46 (Sullivan et al., 2008) polA Cyanopodovirus CP-DNAP-349F
CP-DNAP-533Ra
CP-DNAP-533RbCCAAAYCTYGCMCARGT
CTCGTCRTGSACRAASGC
CTCGTCRTGDATRAASGC48/58 (Chen et al., 2009) RNR S-CBS4 subtype RNR F
RNR RATGGMATYGAAGCVWSYTGGCG
AAYGTHTGCYTGGARGTWTAYCT43/55 This study terL S-CBS1/S-CBS3 subtype TerL F
TerL RCGTGTKGTGCTGATGTT
TCARCGCHGAKGGCYTGAT37/50 This study mcp S-CBS2/PSS2 subtype MCP F
MCP RTGSCCGRMGTkGSYTTCCGT
CCAYTCRAbGCGRGTSA42/56 This study mcp Phycodnavirus mcp F
mcp RGGYGGYCARCGYATTGA
TGIARYTGYTCRAYIAGGTA45/58 (Larsen et al., 2008) polB Phycodnavirus AVS1
AVS2
PolGARGGIGCIACIGTIYTIGAYGC
GCIGCRTAICKYTTYTTISWRTA
SWRTCIGTRTCICCRTA40/52 (Chen and Suttle, 1995) Note: g20: minor capsid assembly protein genes of cyanomyoviruses; polA: DNA polymerase I genes of cyanopodoviruses; RNR, terL, and mcp: ribonucleotide reductase genes, large terminase subunit genes, and major capsid protein genes of cyanosiphoviruses, respectively; polB and mcp: DNA polymerase genes of family B and major capsid protein genes of phy-codnavirus, respectively Table 1. Primer sets used for amplification of algal virus-like sequences from East Lake.
Figure 5 个
Table 1 个