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piRNA id Chomosome Strand Start End Sequence hsa_piR_020391 chr18 - 11, 644, 914 11, 644, 943 UGGUGAGAACUGACAAAUGUGGUAGGUGGU hsa_piR_000651 chr15 - 20, 649, 047 20, 649, 074 ACCAAACCCAUUCUCCCAUCAGUGCUGC hsa_piR_000805 chr15 + 60, 329, 537 60, 329, 567 ACCUAGGACUUGACCAAGGCCACAGCCAGGU chr13 + 130, 067, 407 130, 067, 437 hsa_piR_001311 chr1 - 16, 745, 061 16, 745, 089 AUUGGUGGUUCAGUGGUAGAAUUCUCGCC chr1 + 17, 061, 005 17, 061, 033 chr3 + 15, 524, 505 15, 524, 533 hsa_piR_017716 chr15 + 49, 375, 486 49, 375, 517 UGGAUUUCCAGAAGCUGCUUGAUGAUUCUUCC hsa_piR_004307 chr10 + 126, 301, 128 126, 301, 156 UCCAAAUCGUUCCUUGGGCCCGAGACUCC hsa_piR_020326 chr2 - 94, 796, 255 94, 796, 280 UGGUGAAAUGAACUUCUAGGCAGCAA chr8 + 43, 498, 228 43, 498, 253 chr9 + 42, 454, 099 42, 454, 124 chr9 - 43, 027, 769 43, 027, 794 chr9 - 43, 966, 958 43, 966, 983 chr9 - 66, 114, 219 66, 114, 244 chr9 + 68, 761, 351 68, 761, 376 Table 1. Characteristics of seven known piRNAs in the H1-HeLa cells.
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piRNA id Chromosome Repeat family Strand - Start End Sequence novel_pir97924 chr8 LINE/L1 - 136, 785, 683 136, 786, 238 GGGGGGCCCAAGTCCTTCTG novel_pir78110 chr3 DNA/hAT-Charlie - 61, 684, 855 61, 685, 144 CCACCCTGAACGCGCCCGA novel_pir78107 chr3 DNA/hAT-Charlie - 61, 684, 855 61, 685, 144 ACCACCCTGAACGCGCCCGA novel_pir78097 chr3 DNA/hAT-Charlie - 61, 684, 855 61, 685, 144 TACCACCCTGAACGCGCCCGA novel_pir78094 chr3 DNA/hAT-Charlie - 61, 684, 855 61, 685, 144 TACCACCCTGAACGCGCCCG novel_pir76584 chr3 DNA/hAT-Charlie - 31, 021, 593 31, 021, 781 GTTGGGACAAAAAAAAAA novel_pir73855 chr3 LTR/ERVK - 15, 779, 666 15, 780, 942 TTCTGGGCTGTAGTGCGCTA novel_pir70108 chr2 LTR/ERVL-MaLR - 12, 439, 669 12, 440, 139 GGTTGGGAAAAAAAAAAAA novel_pir70106 chr2 LTR/ERVL-MaLR - 12, 439, 669 12, 440, 139 GGTTGGGAAAAAAAAAAAAA novel_pir46604 chr18 LTR/ERV1 + 68, 878, 785 68, 880, 277 GGGCGGCGGGGCGGGGCGG novel_pir33182 chr14 LTR/ERV1 102, 706, 661 102, 707, 085 TCCCGGGTTTCGGCACCAAA novel_pir15900 chr11 DNA/hAT-Tip100 + 62, 126, 034 62, 126, 618 TGGTTAGCACTCTGGACT novel_pir105705 chrX LINE/L1 + 121, 106, 366 121, 108, 397 ACGTAGCAGAGCAGCTCCCTCGC novel_pir105700 chrX LINE/L1 + 121, 106, 366 121, 108, 397 TACGTAGCAGAGCAGCTCCCTCGC Table 2. Characteristics of 14 novel piRNAs in the H1-HeLa cells.
Figure 7 个
Table 2 个
