Figure 3个  Table 2个
    • Gene function Names of genes presented in CnmeGV(ORF numbers of CnmeGV) Genes missing in CnmeGV
      Transcription (9) lef-11(29), 39k(30), p47(50), lef-6(60), lef-5(69), lef-4(76), vlf-1(90), lef-9(100), lef-8(109) pe-38
      Replication (12) ie-1(6), lef-2(21), lef-1(54), dbp(61), dnapol(63, 107), helicase(72), rr1(93), dnaligase(98), lef-3(104), me53(118) rr2
      Structure (30) granulin(1), p78/83(2), pk-1(3), odv-e18(11), pep-1(15), pep/p10(17), pep-2(18), odv-ec43(32), odv-e66(41), efp(45), BV-e31(51), p24(52), p6.9(68), odv-e25(73), p18(74), p33(75), vp39(77), odv-e27(78), tlp20(83), gp41(88), fp25k(99), vp1054(115) --
      Per os infectivity pif-5(13), p74(27), pif-3(42), pif-2(48), pif-1(55), pif-4(71), vp91 (82), pif-6(103) --
      Auxiliary (11) sod(28), ubiquitin(33), mp-nase(39), fgf-1(56), bro-A(57), bro-B(85), bro-C(86), alk-exo(94), fgf-2(96), iap-5(101), fgf-3 (117) chitinase, cathepsin, ctl, p35, lef-10, egt, gp37, enhancin
      Unknown (45) 4, 5, 7, 8, p49(12), 14, 16, 20, 22, 25, p22.2 (26), 31, 34, 35, 36, 37, 38, 40, 43, 44, 49, 38.7k (53), 59, 62, 64, p45/48(65), p12(66), p40/c42(67), 38k(70), 80, 87, 89, 91, 92, 95, 102, 105, desmoplakin (106), 108, 110, 111, 112, 113, 114 --
      CnmeGV unique (13) 9, 10, 19, 23, 24, 46, 47, 58, 79, 81, 84, 97, 116 --
      Note: The ORFs that are presented in all sequenced baculoviruses are printed in bold.

      Table 1.  CnmeGV genes grouped according to function.

    • CnmeGV Homologous ORFs in GVs (ORF number/amino acid identity based on Blastp results %)
      orf start end aa name Ador Agse CaL Choc Clan Cp Crle Epap Hear Phop Pira Plxy Psun Splt Xecn
      1 1 > 750 249 granulin 1/83 1/80 1/83 1/83 1/83 1/84 1/84 1/84 1/80 1/82 1/76 4/79 1/79 1/79 1/80
      2 747 < 1220 157 p78/83 2/33 2/52 2/39 2/43 2/41 2/41 2/35 5/33 2/29 2/51 2/29
      3 1207 > 2016 269 pk-1 3/52 3/46 3/50 3/55 3/52 3/48 3/55 6/42 3/45 3/52 3/58 6/46 3/46 3/43 3/43
      4 2452 < 3081 209 4/26 6/28 4/31 5/35 4/33 4/35 4/36 4/26 6/27 4/33 4/34 8/20 6/26 5/29 7/27
      5 3071 > 3346 91 5/38 7/31 5/43 6/42 5/48 5/42 5/40 5/32 5/43 9/30 6/39
      6 3326 < 4720 464 ie-1 6/43 8/32 6/39 7/43 6/38 7/40 6/37 35/32 8/31 6/36 6/46 10/29 8/30 7/28 9/31
      7 4654 > 5238 194 ep23 7/41 9/42 7/48 8/44 7/47 8/42 7/49 34/41 9/31 7/38 7/54 11/32 9/33 8/31 10/31
      8 5339 < 5662 107 chtB1 8/47 10/40 8/50 9/51 8/50 9/55 8/55 33/47 10/42 8/49 8/52 12/53 10/42 9/46 11/42
      9 5820 < 7844 674 U
      10 8455 > 8739 94 U
      11 8980 < 9261 93 odv-e18 10/74 11/52 13/74 12/86 13/73 14/77 13/78 29/73 11/58 12/76 14/81 13/69 11/57 10/63 12/60
      12 9262 < 10650 462 p49 11/49 12/46 14/51 13/56 14/51 15/57 14/57 28/43 12/40 13/38 15/60 14/41 12/39 11/41 13/40
      13 10678 > 11775 365 pif-5 12/66 15/57 15/71 14/74 15/67 18/70 17/69 27/68 14/51 16/68 16/67 16/64 14/53 13/53 15/50
      14 11776 > 11994 72 19/40
      15 11989 < 12624 211 pep-1 16/44 18/48 19/53 17/59 19/54 20/50 20/55 25/51 16/50 19/52 20/51 20/66 16/51 15/46 17/50
      16 12614 > 13186 190 9/38 33/32 10/32 8/36 10/31 11/31
      17 13278 > 14228 316 pep/p10 17/53 19/49 36/52 18/57 35/53 22/51 23/55 22/52 18/59 20/56 21/56 21/47 18/60 19/40 19/59
      18 14264 > 14728 154 pep-2 18/40 20/47 37/54 19/49 36/53 23/48 24/49 21/42 17/46 21/50 22/48 23/46 17/46 18/42 18/47
      19 15143 < 15415 90 U
      20 15606 > 16982 458 21/29 40/25 38/25 29/30 24/24
      21 16985 > 17392 135 lef-2 32/27 35/27 30/40 29/33 29/28 41/45 38/31 33/36 37/46 33/53 33/39 32/26 35/27
      22 17525 > 17767 80 33/42 36/41 29/45 30/46 28/49 42/40 39/40 38/37 34/45 34/38 33/38 36/37
      18102 > 18575 non-hr like
      23 18523 < 18693 56 U
      24 19000 > 19422 140 U
      25 19491 > 20090 199 56/48 57/50 48/51 59/56 54/54
      26 20174 > 20809 211 p22.2 64/26 52/33
      27 21892 > 23865 657 p74 53/52 56/48 52/52 46/58 49/54 60/58 58/58 59/51 72/41 55/57 51/56 49/51 77/43 77/43
      28 24446 > 24946 166 sod 51/59 54/59 51/60 44/66 48/61 59/66 57/62 58/60 63/59 54/62 50/71 64/61 68/54
      29 24972 > 25295 107 lef-11 50/52 52/54 50/59 43/64 47/64 58/60 56/60 57/42 51/51 53/58 49/61 46/48 54/57 49/49 56/54
      30 25258 > 26397 379 39k 49/31 51/26 42/28 46/28 57/45 55/24 56/32 52/31 48/36
      31 26431 < 26604 57 47/47 49/47 47/33 41/51 45/33 56/62 54/54 49/38 51/40 47/62 54/38
      32 26627 < 27700 357 odv-ec43 46/54 48/57 46/55 40/60 44/54 55/52 53/57 53/53 48/41 50/46 46/66 43/48 51/41 46/48 53/41
      33 27790 > 28074 94 ubiquitin 45/76 47/73 45/80 39/83 43/80 54/80 52/84 52/83 47/83 49/76 45/84 42/77 50/83 45/80 52/83
      34 28130 < 28276 49 44/45 20/56 38/68 20/56 53/61 51/51 46/53 48/55 41/50 48/47 43/55 51/53
      35 28291 > 28980 229 43/74 46/69 21/60 37/84 21/59 52/81 50/70 50/69 45/67 47/74 43/83 40/53 47/65 42/64 50/67
      36 28990 < 31503 837 42/33 45/30 22/28 22/27 50/38 47/48 46/38 42/30 41/26
      37 31531 > 31731 66 41/42 44/33 49/40 46/45 45/45 41/41 44/40 46/38
      38 31798 < 32268 156 36/33 40/31 27/28 32/32 26/30 36/33
      39 32253 < 33578 441 mp-nase 37/32 41/34 26/39 33/40 25/37 46/38 43/41 44/34 38/29 41/35 37/43 35/28 38/30 37/30 40/29
      40 33644 < 34045 133 29/58 34/40 41/52 28/54 39/53 39/56 36/58 40/55 34/58 31/53 31/43 32/42 31/37 34/42
      41 34012 > 36279 755 odv-e66 28/60 33/37 27/66 37/68 35/62 39/52 150/40 33/67 44/54 30/52 156/41 149/41
      42 36280 < 36864 194 pif-3 26/38 29/36 34/46 26/42 33/45 35/45 34/47 38/42 30/43 31/42 30/47 29/41 30/46 27/46 32/44
      43 36924 > 37577 217 25/24 27/29 33/21 24/29 32/24 33/24 32/24 37/26 28/32 29/29 28/30 28/28 28/27 26/27
      44 37669 < 38604 311 27/37
      45 38798 < 40582 594 efp 23/41 25/48 31/44 23/53 30/45 31/52 30/53 14/42 26/31 27/49 26/55 26/41 26/32 24/38 27/32
      46 40704 < 41780 358 U
      47 41925 < 43061 378 U
      48 43398 > 44297 299 pif-2 39/64 43/50 24/67 35/69 23/67 48/70 45/67 47/61 42/55 44/66 40/68 37/57 43/54 39/57 45/54
      49 44662 < 45363 233 59/48 49/60 62/56 60/51
      50 45371 > 46594 407 p47 58/58 60/54 58/57 50/60 55/57 68/60 61/60 63/56 74/53 61/57 56/63 51/53 79/54 58/53 78/52
      51 46629 > 47339 236 BV-e31 59/63 61/60 59/58 51/63 56/58 69/67 62/67 65/57 77/56 62/64 57/69 52/66 82/56 59/57 79/57
      52 47357 > 47809 150 p24 60/48 62/47 60/47 52/56 57/47 71/52 63/53 66/47 78/40 63/48 58/51 53/47 83/39 60/48 80/40
      53 47873 < 48184 103 38.7k 63/36 54/33 65/33 67/33 65/34 59/41 54/43
      54 48165 < 48953 262 lef-1 62/51 64/48 63/59 55/59 60/58 74/56 66/59 68/53 80/45 66/51 60/56 55/47 85/47 62/48 82/45
      55 48865 > 50529 554 pif-1 63/46 65/37 64/47 56/50 61/46 75/50 67/50 69/44 82/41 67/45 61/51 7/42 87/40 64/41 84/40
      56 50540 < 51262 240 fgf-1 64/39 66/31 65/41 57/43 62/42 76/39 68/39 70/32 83/29 69/46 62/45 56/42 88/31 66/32 85/30
      57 51944 < 53362 472 bro-A 54/67 137/70 111/74 60/71
      58 53820 < 54143 107 U
      59 54398 > 54784 128 65/42 67/37 67/39 59/36 64/42 79/35 70/36 73/32 85/31 71/37 64/44 59/65 90/29 68/47 87/31
      60 54803 < 55120 105 lef-6 67/42 68/31 68/29 60/38 65/28 80/39 71/40 74/33 86/30 72/35 65/43 60/32 91/32 69/39 88/34
      61 55162 < 56094 310 dbp 68/29 69/26 69/30 61/31 66/29 81/33 72/29 75/25 73/31 66/27 61/27 70/29
      62 56108 < 56377 89 62/38 82/36 73/40
      63 56371 > 56559 62 dnapol
      64 56636 < 56962 108 70/37 63/31 67/38 82/38 73/34 77/35 67/45
      65 57010 > 58194 394 p45/p48 69/66 72/61 71/64 64/71 68/64 83/72 74/72 78/57 90/55 75/67 68/73 63/51 95/55 73/52 91/55
      66 58221 > 58595 124 P12 70/57 73/48 72/59 65/53 69/56 84/55 75/54 79/43 91/44 76/32 69/60 64/38 96/44 74/42 92/44
      67 58632 > 59789 385 p40/c42 71/56 74/51 73/58 66/58 70/58 85/58 76/59 80/49 92/46 77/49 70/60 66/44 97/46 75/45 93/46
      68 59805 > 59978 57 p6.9a 72/ 75/86 74/63 67/ 71/63 86/60 77/ 81/46 93/71 78/ 71/56 67/57 98/86 94/71
      69 60065 < 60838 257 lef-5 73/55 76/51 75/61 68/61 72/61 87/59 78/59 82/51 94/51 79/59 72/65 69/52 99/48 76/50 95/51
      70 60791 > 61777 328 38k 74/56 77/49 76/62 69/58 73/62 88/58 79/56 83/49 95/47 80/57 73/63 70/46 100/49 77/50 96/46
      71 61737 < 62075 112 pif-4 75/50 78/50 77/49 70/54 74/51 89/51 80/54 84/45 96/44 81/41 74/56 71/42 101/45 79/48 97/44
      72 62210 > 65695 1161 helicase 76/38 79/32 78/38 71/40 75/38 90/37 81/36 85/30 97/31 82/32 75/41 72/32 102/31 80/31 98/31
      73 65828 < 66475 215 odv-e25 77/63 81/56 79/56 72/64 76/56 91/66 82/67 86/60 98/56 83/60 76/65 74/60 103/55 81/57 99/56
      74 66599 < 67078 159 p18 78/39 82/45 80/50 73/55 77/50 92/55 83/49 87/50 99/46 84/49 77/63 75/43 104/46 82/39 100/48
      75 67148 > 67939 263 p33 79/53 83/53 81/55 74/58 78/54 93/57 84/56 88/57 100/52 85/55 78/66 76/55 105/52 83/51 101/51
      76 68076 < 69524 482 lef-4 80/48 85/45 83/46 75/53 80/46 95/47 86/46 91/47 112/41 87/50 80/54 78/42 114/41 86/44 110/42
      77 69615 > 70508 297 vp39 81/61 86/33 84/60 76/58 81/59 96/52 87/53 92/39 113/36 88/48 81/65 79/33 115/36 87/36 111/35
      78 70586 > 71488 300 odv-e27 82/51 87/41 85/57 77/55 82/58 97/55 88/53 93/41 114/40 89/42 82/60 80/36 116/41 88/43 112/41
      79 71520 > 71729 69 U
      80 72155 < 72967 270 83/30 88/24 86/29 78/35 83/29 99/27 90/30 94/24 116/27 92/27 83/28 82/31 117/26 89/26 113/27
      81 73024 > 73302 92 U
      82 73324 < 75132 602 vp91 85/40 91/32 88/40 80/35 86/39 101/40 92/41 96/34 121/39 94/42 85/40 84/35 122/36 92/33 118/40
      83 75104 > 75601 165 tlp20 86/30
      84 75618 < 76010 130 U
      85 76616 > 78076 486 bro-B 101/66 167/59 109/65
      86 78318 > 78800 160 bro-C 110/48 111/44 108/46
      87 79019 > 79636 205 87/64 94/55 90/64 82/71 88/69 103/73 94/72 98/67 123/57 96/69 87/70 86/64 124/57 94/57 120/57
      88 79596 > 80468 290 gp41 88/46 95/55 91/57 83/61 89/59 104/66 95/63 99/59 124/47 97/58 88/63 87/44 125/48 95/53 121/48
      89 80491 > 80805 104 90/41 85/40 90/35 105/39 96/46 98/40 89/42
      90 80771 > 81895 374 vlf-1 91/67 97/61 93/67 86/67 91/67 106/71 97/69 101/48 126/53 99/68 90/76 89/49 127/51 97/55 123/53
      91 81912 > 82166 84 92/68 99/58 94/37 88/76 92/70 107/70 98/70 102/62 128/56 100/64 91/81 91/56 129/56 99/58 125/54
      92 82800 > 83660 286 109/31 117/27 111/29 106/34 110/29 130/35 118/39 121/26 109/30 108/29 119/30
      93 83938 > 84510 190 rr1 127/26 119/32
      94 84571 < 85893 440 alk-exo 107/38 115/38 110/40 104/40 109/40 125/39 115/38 119-120/40 146/38 114/39 107/41 106/36 152/39 117/33 145/38
      95 85955 < 86251 98 106/40 109/49 103/62 108/48 124/55 114/54 115/53 106/45
      96 86359 > 87711 450 fgf-2 105/26 113/31 108/31 102/43 107/32 123/34 113/38 118/32 145/25 116/40 105/36 104/29 151/25 116/28 144/27
      97 88307 < 88672 121 U
      98 88812 > 90563 583 ligase 103/49 110/50 105/48 99/55 104/49 120/54 110/56 115/46 142/43 112/50 102/61 101/42 148/43 110/44 141/43
      99 90706 < 91161 151 fp 25k 101/50 108/56 103/57 97/57 102/56 118/56 108/58 113/49 141/51 110/53 100/55 100/48 146/44 109/51 140/51
      100 91234 < 92727 497 lef-9 100/68 107/65 102/64 96/69 101/66 117/68 107/71 112/69 140/62 109/73 99/72 99/64 145/62 107/65 139/61
      101 93356 < 94207 283 iap-5 99/49 106/43 101/54 95/54 100/53 116/53 106/53 111/44 139/34 108/54 98/58 98/36 143/33 106/38 137/34
      102 94261 < 94767 168 98/31 105/25 101/33 94/32 100/34 115/26 105/24 110/28 107/30 97/31 105/47
      103 94773 < 95159 128 pif-6 97/59 104/54 100/56 93/65 98/56 114/60 104/60 109/48 137/45 106/51 96/57 96/51 141/48 104/48 135/45
      104 95125 > 96204 359 lef-3 96/25 99/23 92/24 97/25 113/27 108/23 95/24
      105 96201 < 96500 99 69/43 74/42 75/43
      106 96596 < 98482 628 desmoplakin 95/28 102/26 98/23 96/26 112/30 102/26 107/32 104/27 94/31
      107 98481 > 101741 1086 polymerase 94/48 101/46 97/48 90/48 95/47 111/49 101/47 106/45 134/44 103/47 93/49 93/40 138/43 101/41 132/44
      108 101738 < 102205 155 93/56 100/48 96/47 89/57 94/48 108/53 99/52 103/46 129/28 101/55 92/52 92/41 130/28 100/40 126/28
      109 102606 < 105233 875 lef-8 110/66 118/62 112/61 107/67 111/62 131/67 119/67 122/63 149/61 121/67 110/68 109/61 155/61 121/60 148/61
      110 105394 > 105786 130 113/26 113/26 111/28
      111 105857 < 106063 68 108/35 114/32 133/40 168/31 112/50 172/30 170/29
      112 106065 > 106466 133 111/56 122/51 115/54 109/59 115/55 134/60 121/62 125/52 169/41 122/63 113/64 112/46 173/40 127/39 171/41
      113 106450 < 107439 329 113/40 124/38 116/31 110/30 116/30 135/30 122/33 126/37 170/33 123/37 114/32 174/28 128/37 172/33
      114 107466 < 107660 64 114/48 117/42 111/44 117/45 136/35 123/35 115/55
      115 107738 > 108745 335 vp1054 115/50 127/46 119/54 113/54 119/55 138/52 125/54 129/44 173/41 126/48 116/56 115/39 177/43 130/41 175/42
      116 108764 > 108988 74 U
      117 108999 > 110159 386 fgf-3 117/36 128/38 121/40 114/35 121/35 140/38 127/40 131/30 128/32 118/42 117/27 133/28
      118 110278 > 111231 317 me-53 119/46 131/39 123/47 116/51 123/48 143/50 129/51 133/32 178/33 130/46 120/55 120/40 182/32 134/34 180/32
      Note: The viruses used in this table are Adoxophyes orana granulovirus (AdorGV), Agrotis segetum granulovirus (AgseGV), Clostera anastomosis granulovirus (CaLGV), Choristoneura occidentalis granulovirus (ChocGV), Clostera anachoreta granulovirus (ClanGV), Cydia pomonella granulovirus (CpGV), Cryptophlebia leucotreta granulovirus (CrleGV), Epinotia aporema granulovirus (EpapGV), Helicoverpa armigera granulovirus (HearGV), Phthorimaea operculella granulovirus (PhopGV), Pieris rapae granulovirus (PrGV), Plutella xylostella granulovirus (PlxyGV), Pseudaletia unipuncta granulovirus (PsunGV), Spodoptera litura granulovirus (SpltGV) and Xestia c-nigrum granulovirus (XecnGV).
      a: This ORF has only low identity to several NPVs;
      U: These ORFs are unique to CnmeGV genome

      Table S1.  Analysis and homology search of CnmeGV ORFs