-
-
-
-
-
-
-
-
-
-
Virusesa Collection date HA(H3 numbering) PB2 NA M2 PB1-F2 Connecting peptide 110 158 160 224-228 318 519 627 701 274b Stalk deletion 27 31 58-90 truncated A/tiger/Jiangsu/01/2013 2013.1.20 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Alberta/01/2014 2014.1.3 RERRRKRG H D A NRQSG T Q E D H 49–68 I S Yes A/Stone_curlew/Dubai/AR3444-25042/2014 2014.11.17 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Quail/Dubai/AR3445-25043/2014 2014.11.30 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Sea_Gull/Dubai/AR3443-25041/2014 2014.12.1 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Duck/Dubai/2459/2014 2014.12.7 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Falcon/Dubai/2506/2014 2014.12.7 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Falcon/Dubai/AR3430-2293/2014 2014.12.7 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Hoabara/Dubai/2455.5/2014 2014.12.7 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/chicken/Ghana/15VIR2588-9/2015 2015(NO DATE) RERRRKRG H D A NGQSG T A/chicken/Ghana/FJ152511/2015 2015(NO DATE) RERRRKRG H G A NGQSG T H 49–68 A/chicken/Nigeria/15VIR339-2/2015 2015.1 RERRRKRG H X A NGQSG T Q E D H 49–68 I S No A/chicken/Niger/15VIR2060-6/2015 2015.4.4 RERRRKRG H D A NGQSG T A/chicken/Burkina_Faso/15VIR1774-35/2015 2015.3.23 RERRRKRG H D A NGQSG T A/duck/Ivory_Coast/15VIR-2742-1/2015 2015.4.13 RERRRKRG H D A NGQSG T A/enviroment/Henan/SMX1/2015 2015.1.5 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/whooper_swan/Henan/SMX1/2015 2015.1.4 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/whooper_swan/Henan/SMX3/2015 2015.1.5 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/whooper swan/Henan/SMX4/2015 2015.1.4 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/whooper_swan/Henan/SMX9/2015 2015.1.5 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/pochard/Henan/SMX1/2015 2015.1.5 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/dalmatian_pelican/Bulgaria/3/2015 2015.1.23 RERRRKRG H N A NGQSG T A/dalmatian_pelican/Bulgaria/4/2015 2015.1.23 RERRRKRG H N A NGQSG T A/chicken/Bulgaria/5407/15 2015.1.30 RERRRKRG H N A NGQSG T A/chicken/Bulgaria/5408/15 2015.1.30 RERRRKRG H N A NGQSG T A/chicken/Bulgaria/5409/15 2015.1.30 RERRRKRG H N A NGQSG T A/pelican/Romania/12449/2015 2015.3.26 RERRRKRG H N A NGQSG T A/rook/Chany/32/2015 2015.5.7 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/rook/Dovolnoe/50/2015 2015.5.7 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/rook/Sartlan/42/2015 2015.5.7 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Brain1/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Brain2/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Lung2/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Brain3/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Liver3/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Lung3/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Lung3-2/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Oropharynx swab3/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Trachea3/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Black-necked Grebe/Inner Mongolia/Anal swab4/2015 2015.5.12 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Bar-headed Goose/Qinghai/BTY2/2015 2015.7.14 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Great black-headed Gull/Qinghai/YO1/2015 2015.7.14 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes A/Great black-headed Gull/Qinghai/YO6/2015 2015.7.14 RERRRKRG H D A NGQSG T Q E D H 49–68 I S Yes Table S1. Comparison of key amino acid pattern of Clade 2.3.2.1c HPAI A (H5N1) viruses from different geographic regions
Figure 9 个
Table 1 个
