Figure 5个  Table 3个
    • Bat species Pattern No. of tested samples (positive) Location Time (month/year)
      swab/faces/urine (CoV)(AdV)(PMV)
      Familiy Pteropodidae
      　 Cynopterus sphinx 1/0/0 1(0)(0)(0) 4 3/2016
      　 Eonycteris spelaea 0/1/0 1(0)(0)(0) 2 5/2015
      Familiy Rhinolophidae
      　 Rhinolophus pusillus 0/356/0 356(2)(0)(1) 2, 5 4, 5, 9, 10, 12/2015; 2/2016
      　 Rhinolophus sinicus 0/0/2 2(0)(0)(0) 6 11/2015
      Familiy Hipposideridae
      　 Hipposideros armiger 0/421/0 421(0)(4)(0) 2, 4, 6, 7 4, 6, 7, 8, 9, 10, 12/2015; 3/2016
      Famliy Vespertilionidae
      　 Pipistrellus abramus 8/4/0 12(0)(2)(0) 3 4, 9/2015
      　 Pipistrellus minus 13/0/0 13(0)(0)(0) 3 9/2015
      　 Miniopterus schreibersii 78/0/0 78(24)(0)(1) 1 7/2015; 3/2016
      　 Myotis ricketti 42/0/0 42(10)(16)(0) 1 7/2015; 3/2016
      　 Tylonycteris pachypus 78/0/0 78(14)(0)(0) 4 4, 7/2015; 5/2016

      Table 1.  Samples collected and virus detection results

    • Virus species Bat species and number of individuals in which viruses were detected
      R. pusillus H. armiger P. abramus M. schreibersii M. ricketti T. pachypus
      CoV HKU4 14
      HKU7 1
      1A/1B 2 23
      HKU6 10
      AdV Unclassified 4 2 16
      PMV Unclassified 1 1
      Co-infection 1A/Unclassified PMV 1
      HKU6/Unclassified AdV 10
      Note: Abbreviated species names: R. pusillus, Rhinolophus pusillus; H. armiger, Hipposideros armiger; P. abramus, Pipistrellus abramus; M. schreibersii, Miniopterus schreibersii; M. ricketti, Myotis ricketti; T. pachypus, Tylonycteris pachypus.

      Table 2.  Coronaviruses, adenoviruses and paramyxoviruses detected in different bat species

    • Strain Accession No. Host species BtTpCoV160079 BtTpCoV160081 BtTpCoV161028
      Nucleotide sequence identity/Amino acid sequence identity
      133/2005 DQ648794 Tylonycteris pachypus 97.4/97.6 97.4/97.6 93.6/97.9
      GX2012 KJ473822 Tylonycteris pachypus 93.2/96.2 93.2/96.2 96.3/96.3
      NeoCoV KC869678 Neoromicia capensis 63.0/60.3 63.2/60.5 63.1/60.4
      EriCoV NC_022643 Erinaceus europaeus 62.3/57.5 62.2/57.4 62.4/57.2
      SC2013 KJ473821 Vespertilio superans 68.2/70.6 68.6/70.8 68.6/71.2
      HKU4 NC_009019 Tylonycteris pachypus 96.1/98.4 95.3/97.7 95.5/97.9
      HKU5 NC_009020 Pipistrellus abramus 68.9/69.4 69.1/69.3 68.8/69.3
      MERS-CoV KJ477102 Camel 67.5/67.2 67.8/67.4 67.5/67.4
      MERS-CoV NC_019843 Human 67.4/67.5 67.8/67.6 67.5/67.7

      Table 3.  Comparison of S gene between HKU4-related strains detected in Macau and other Lineage C betacoronaviruses.